PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA11g07570
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family CAMTA
Protein Properties Length: 90aa    MW: 10686.3 Da    PI: 9.2598
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA11g07570genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-191.38.9e-291588375
        CG-1  3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKv 75
                +e ++rwl ++ei++iL  ++++ lt++++++p+ gsl+L++rk+vryf kDG++w+kkkdgk v+E+ ekL v
  CA11g07570 15 QEaNHRWLCPHEICEILRYHQSFYLTQQPPDKPPGGSLFLFDRKIVRYFCKDGHNWRKKKDGKNVKEAREKLFV 88
                5559*******************************************************************965 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143742.6461089IPR005559CG-1 DNA-binding domain
SMARTSM010767.7E-141389IPR005559CG-1 DNA-binding domain
PfamPF038598.6E-261688IPR005559CG-1 DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 90 aa     Download sequence    Send to blast
MAHTTQPLDL EHILQEANHR WLCPHEICEI LRYHQSFYLT QQPPDKPPGG SLFLFDRKIV  60
RYFCKDGHNW RKKKDGKNVK EAREKLFVL*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016574930.14e-51PREDICTED: calmodulin-binding transcription activator 3-like isoform X1
SwissprotQ6NPP41e-37CMTA2_ARATH; Calmodulin-binding transcription activator 2
TrEMBLD7MR889e-36D7MR88_ARALL; Calmodulin-binding protein
STRINGscaffold_803130.12e-35(Arabidopsis lyrata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA14489811
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64220.26e-39Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains